HDF5_DIR environment variable not set, checking some standard locations ..
checking /home/kare ...
checking /usr/local ...
checking /sw ...
checking /opt ...
checking /opt/local ...
checking /usr ...
HDF5 found in /usr

NETCDF4_DIR environment variable not set, checking standard locations.. 
checking /home/kare ...
checking /usr/local ...
checking /sw ...
checking /opt ...
checking /opt/local ...
checking /usr ...
netCDF4 found in /usr
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building py_modules sources
building extension "netCDF4" sources
build_src: building npy-pkg config files
running build_py
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'netCDF4' extension
compiling C sources
C compiler: gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes

compile options: '-I/usr/include -I/usr/include -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c'
gcc: netCDF4.c
netCDF4.c: In function ‘__pyx_pf_7netCDF4_6getlibversion’:
netCDF4.c:2513:21: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att_names’:
netCDF4.c:8696:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:8764:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att’:
netCDF4.c:8928:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:8956:10: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:8956:10: note: each undeclared identifier is reported only once for each function it appears in
netCDF4.c:9019:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:9334:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_format’:
netCDF4.c:9687:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__set_att’:
netCDF4.c:10221:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10404:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_types’:
netCDF4.c:10494:3: warning: implicit declaration of function ‘nc_inq_typeids’
netCDF4.c:10513:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10612:7: warning: implicit declaration of function ‘nc_inq_user_type’
netCDF4.c:10631:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10666:14: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c:10802:14: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_dims’:
netCDF4.c:11034:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11106:7: warning: implicit declaration of function ‘nc_inq_dimids’
netCDF4.c:11125:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11209:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_grps’:
netCDF4.c:11353:3: warning: implicit declaration of function ‘nc_inq_grps’
netCDF4.c:11372:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11456:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11492:7: warning: implicit declaration of function ‘nc_inq_grpname’
netCDF4.c:11511:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_vars’:
netCDF4.c:11707:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11788:7: warning: implicit declaration of function ‘nc_inq_varids’
netCDF4.c:11807:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11900:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11963:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12012:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12093:41: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:12147:20: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c:12245:20: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c:12411:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12460:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset___init__’:
netCDF4.c:13119:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_1close’:
netCDF4.c:13376:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_2sync’:
netCDF4.c:13453:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_5set_fill_on’:
netCDF4.c:13589:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_6set_fill_off’:
netCDF4.c:13667:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_8renameDimension’:
netCDF4.c:13994:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_12renameVariable’:
netCDF4.c:14884:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_18delncattr’:
netCDF4.c:15447:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_5Group___init__’:
netCDF4.c:16522:5: warning: implicit declaration of function ‘nc_def_grp’
netCDF4.c:16541:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:16603:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension___init__’:
netCDF4.c:17093:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_1__len__’:
netCDF4.c:17173:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_2isunlimited’:
netCDF4.c:17265:5: warning: implicit declaration of function ‘nc_inq_unlimdims’
netCDF4.c:17284:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:17365:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable___init__’:
netCDF4.c:18689:7: warning: implicit declaration of function ‘nc_get_var_chunk_cache’
netCDF4.c:18708:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18744:7: warning: implicit declaration of function ‘nc_set_var_chunk_cache’
netCDF4.c:18763:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18827:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18916:11: warning: implicit declaration of function ‘nc_def_var_deflate’
netCDF4.c:18974:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19013:9: warning: implicit declaration of function ‘nc_def_var_fletcher32’
netCDF4.c:19057:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19105:33: error: ‘NC_CONTIGUOUS’ undeclared (first use in this function)
netCDF4.c:19143:33: error: ‘NC_CHUNKED’ undeclared (first use in this function)
netCDF4.c:19280:11: warning: implicit declaration of function ‘nc_def_var_chunking’
netCDF4.c:19333:24: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19378:9: warning: implicit declaration of function ‘nc_def_var_endian’
netCDF4.c:19378:166: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this function)
netCDF4.c:19402:166: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this function)
netCDF4.c:19487:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19543:9: warning: implicit declaration of function ‘nc_def_var_fill’
netCDF4.c:19587:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19847:16: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_1_getdims’:
netCDF4.c:19971:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:20016:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:20082:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_6delncattr’:
netCDF4.c:20886:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_7filters’:
netCDF4.c:21013:3: warning: implicit declaration of function ‘nc_inq_var_deflate’
netCDF4.c:21032:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:21058:3: warning: implicit declaration of function ‘nc_inq_var_fletcher32’
netCDF4.c:21077:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_8endian’:
netCDF4.c:21270:3: warning: implicit declaration of function ‘nc_inq_var_endian’
netCDF4.c:21289:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:21324:10: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this function)
netCDF4.c:21346:10: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_9chunking’:
netCDF4.c:21469:3: warning: implicit declaration of function ‘nc_inq_var_chunking’
netCDF4.c:21488:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_10get_var_chunk_cache’:
netCDF4.c:21670:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_11set_var_chunk_cache’:
netCDF4.c:22020:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_17_assign_vlen’:
netCDF4.c:23950:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:23950:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:24632:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:24733:35: error: expected expression before ‘)’ token
netCDF4.c:24779:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_23_put’:
netCDF4.c:26223:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:26223:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:26798:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:27065:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:27112:37: error: expected expression before ‘)’ token
netCDF4.c:27304:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_24_get’:
netCDF4.c:27378:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:27378:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:27909:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:28103:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:28200:37: error: expected expression before ‘)’ token
netCDF4.c:28277:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_compound’:
netCDF4.c:29404:3: warning: implicit declaration of function ‘nc_def_compound’
netCDF4.c:29423:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:29862:7: warning: implicit declaration of function ‘nc_insert_compound’
netCDF4.c:29881:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:29993:21: warning: assignment discards qualifiers from pointer target type
netCDF4.c:30199:11: warning: implicit declaration of function ‘nc_insert_array_compound’
netCDF4.c:30218:23: warning: assignment discards qualifiers from pointer target type
netCDF4.c:30320:23: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_compound’:
netCDF4.c:30926:3: warning: implicit declaration of function ‘nc_inq_compound’
netCDF4.c:30945:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:31059:5: warning: implicit declaration of function ‘nc_inq_compound_field’
netCDF4.c:31078:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:31289:40: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_vlen’:
netCDF4.c:31950:21: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:32055:7: warning: implicit declaration of function ‘nc_def_vlen’
netCDF4.c:32074:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_vlen’:
netCDF4.c:32185:33: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:32224:5: warning: implicit declaration of function ‘nc_inq_vlen’
netCDF4.c:32243:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘initnetCDF4’:
netCDF4.c:36643:30: error: ‘NC_UBYTE’ undeclared (first use in this function)
netCDF4.c:36667:30: error: ‘NC_USHORT’ undeclared (first use in this function)
netCDF4.c:36691:30: error: ‘NC_UINT’ undeclared (first use in this function)
netCDF4.c:36703:30: error: ‘NC_INT64’ undeclared (first use in this function)
netCDF4.c:36715:30: error: ‘NC_UINT64’ undeclared (first use in this function)
netCDF4.c:36776:30: error: ‘NC_FILL_UBYTE’ undeclared (first use in this function)
netCDF4.c:36800:30: error: ‘NC_FILL_USHORT’ undeclared (first use in this function)
netCDF4.c:36824:39: error: ‘NC_FILL_UINT’ undeclared (first use in this function)
netCDF4.c:36836:35: error: ‘NC_FILL_INT64’ undeclared (first use in this function)
netCDF4.c:36848:43: error: ‘NC_FILL_UINT64’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_6getlibversion’:
netCDF4.c:2513:21: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att_names’:
netCDF4.c:8696:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:8764:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_att’:
netCDF4.c:8928:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:8956:10: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:8956:10: note: each undeclared identifier is reported only once for each function it appears in
netCDF4.c:9019:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:9334:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_format’:
netCDF4.c:9687:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__set_att’:
netCDF4.c:10221:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10404:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_types’:
netCDF4.c:10494:3: warning: implicit declaration of function ‘nc_inq_typeids’
netCDF4.c:10513:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10612:7: warning: implicit declaration of function ‘nc_inq_user_type’
netCDF4.c:10631:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:10666:14: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c:10802:14: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_dims’:
netCDF4.c:11034:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11106:7: warning: implicit declaration of function ‘nc_inq_dimids’
netCDF4.c:11125:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11209:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_grps’:
netCDF4.c:11353:3: warning: implicit declaration of function ‘nc_inq_grps’
netCDF4.c:11372:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11456:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11492:7: warning: implicit declaration of function ‘nc_inq_grpname’
netCDF4.c:11511:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__get_vars’:
netCDF4.c:11707:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11788:7: warning: implicit declaration of function ‘nc_inq_varids’
netCDF4.c:11807:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11900:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:11963:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12012:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12093:41: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:12147:20: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c:12245:20: error: ‘NC_VLEN’ undeclared (first use in this function)
netCDF4.c:12411:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:12460:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset___init__’:
netCDF4.c:13119:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_1close’:
netCDF4.c:13376:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_2sync’:
netCDF4.c:13453:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_5set_fill_on’:
netCDF4.c:13589:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_6set_fill_off’:
netCDF4.c:13667:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_8renameDimension’:
netCDF4.c:13994:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_12renameVariable’:
netCDF4.c:14884:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_7Dataset_18delncattr’:
netCDF4.c:15447:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_5Group___init__’:
netCDF4.c:16522:5: warning: implicit declaration of function ‘nc_def_grp’
netCDF4.c:16541:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:16603:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension___init__’:
netCDF4.c:17093:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_1__len__’:
netCDF4.c:17173:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_9Dimension_2isunlimited’:
netCDF4.c:17265:5: warning: implicit declaration of function ‘nc_inq_unlimdims’
netCDF4.c:17284:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:17365:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable___init__’:
netCDF4.c:18689:7: warning: implicit declaration of function ‘nc_get_var_chunk_cache’
netCDF4.c:18708:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18744:7: warning: implicit declaration of function ‘nc_set_var_chunk_cache’
netCDF4.c:18763:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18827:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:18916:11: warning: implicit declaration of function ‘nc_def_var_deflate’
netCDF4.c:18974:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19013:9: warning: implicit declaration of function ‘nc_def_var_fletcher32’
netCDF4.c:19057:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19105:33: error: ‘NC_CONTIGUOUS’ undeclared (first use in this function)
netCDF4.c:19143:33: error: ‘NC_CHUNKED’ undeclared (first use in this function)
netCDF4.c:19280:11: warning: implicit declaration of function ‘nc_def_var_chunking’
netCDF4.c:19333:24: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19378:9: warning: implicit declaration of function ‘nc_def_var_endian’
netCDF4.c:19378:166: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this function)
netCDF4.c:19402:166: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this function)
netCDF4.c:19487:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19543:9: warning: implicit declaration of function ‘nc_def_var_fill’
netCDF4.c:19587:22: warning: assignment discards qualifiers from pointer target type
netCDF4.c:19847:16: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_1_getdims’:
netCDF4.c:19971:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:20016:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:20082:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_6delncattr’:
netCDF4.c:20886:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_7filters’:
netCDF4.c:21013:3: warning: implicit declaration of function ‘nc_inq_var_deflate’
netCDF4.c:21032:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:21058:3: warning: implicit declaration of function ‘nc_inq_var_fletcher32’
netCDF4.c:21077:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_8endian’:
netCDF4.c:21270:3: warning: implicit declaration of function ‘nc_inq_var_endian’
netCDF4.c:21289:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:21324:10: error: ‘NC_ENDIAN_LITTLE’ undeclared (first use in this function)
netCDF4.c:21346:10: error: ‘NC_ENDIAN_BIG’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_9chunking’:
netCDF4.c:21469:3: warning: implicit declaration of function ‘nc_inq_var_chunking’
netCDF4.c:21488:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_10get_var_chunk_cache’:
netCDF4.c:21670:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_11set_var_chunk_cache’:
netCDF4.c:22020:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_17_assign_vlen’:
netCDF4.c:23950:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:23950:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:24632:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:24733:35: error: expected expression before ‘)’ token
netCDF4.c:24779:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_23_put’:
netCDF4.c:26223:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:26223:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:26798:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:27065:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:27112:37: error: expected expression before ‘)’ token
netCDF4.c:27304:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_pf_7netCDF4_8Variable_24_get’:
netCDF4.c:27378:3: error: ‘nc_vlen_t’ undeclared (first use in this function)
netCDF4.c:27378:14: error: ‘__pyx_v_vldata’ undeclared (first use in this function)
netCDF4.c:27909:18: warning: assignment discards qualifiers from pointer target type
netCDF4.c:28103:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c:28200:37: error: expected expression before ‘)’ token
netCDF4.c:28277:20: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_compound’:
netCDF4.c:29404:3: warning: implicit declaration of function ‘nc_def_compound’
netCDF4.c:29423:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:29862:7: warning: implicit declaration of function ‘nc_insert_compound’
netCDF4.c:29881:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c:29993:21: warning: assignment discards qualifiers from pointer target type
netCDF4.c:30199:11: warning: implicit declaration of function ‘nc_insert_array_compound’
netCDF4.c:30218:23: warning: assignment discards qualifiers from pointer target type
netCDF4.c:30320:23: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_compound’:
netCDF4.c:30926:3: warning: implicit declaration of function ‘nc_inq_compound’
netCDF4.c:30945:15: warning: assignment discards qualifiers from pointer target type
netCDF4.c:31059:5: warning: implicit declaration of function ‘nc_inq_compound_field’
netCDF4.c:31078:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c:31289:40: error: ‘NC_COMPOUND’ undeclared (first use in this function)
netCDF4.c: In function ‘__pyx_f_7netCDF4__def_vlen’:
netCDF4.c:31950:21: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:32055:7: warning: implicit declaration of function ‘nc_def_vlen’
netCDF4.c:32074:19: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘__pyx_f_7netCDF4__read_vlen’:
netCDF4.c:32185:33: error: ‘NC_STRING’ undeclared (first use in this function)
netCDF4.c:32224:5: warning: implicit declaration of function ‘nc_inq_vlen’
netCDF4.c:32243:17: warning: assignment discards qualifiers from pointer target type
netCDF4.c: In function ‘initnetCDF4’:
netCDF4.c:36643:30: error: ‘NC_UBYTE’ undeclared (first use in this function)
netCDF4.c:36667:30: error: ‘NC_USHORT’ undeclared (first use in this function)
netCDF4.c:36691:30: error: ‘NC_UINT’ undeclared (first use in this function)
netCDF4.c:36703:30: error: ‘NC_INT64’ undeclared (first use in this function)
netCDF4.c:36715:30: error: ‘NC_UINT64’ undeclared (first use in this function)
netCDF4.c:36776:30: error: ‘NC_FILL_UBYTE’ undeclared (first use in this function)
netCDF4.c:36800:30: error: ‘NC_FILL_USHORT’ undeclared (first use in this function)
netCDF4.c:36824:39: error: ‘NC_FILL_UINT’ undeclared (first use in this function)
netCDF4.c:36836:35: error: ‘NC_FILL_INT64’ undeclared (first use in this function)
netCDF4.c:36848:43: error: ‘NC_FILL_UINT64’ undeclared (first use in this function)
error: Command "gcc -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/usr/include -I/usr/include -I/usr/lib/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c netCDF4.c -o build/temp.cygwin-1.7.9-i686-2.6/netCDF4.o" failed with exit status 1