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Can you upgrade to the latest Cygwin 1.7 package and try again. From
your
cygcheck output, it looks like things are not correct but this may be
just
a problem with an old cygcheck that doesn't know how to find the
implicit
mounts. If the issue is still the same, resending the output of the new
cygcheck would be helpful.
I just downloaded the newest version of cygwin 1.7 as of 6-19-09 at
approximately 3:30 CST and had the exact same results. Please find the
new cygcheck.out file attached. You mentioned above that their might be
a problem with the mounts. Not sure if it helps to know this, but I can
successfully use rsync to copy many gigabytes of files. It just hangs
when there are thousands of files in a single directory (9,000 seems to
always do it.). Also note that this cygcheck was done on a different
computer than the first just to make sure this isn't computer specific.
Again, I have tried it on several.